Researchers in Dr. Carlos D. Bustamante's lab have developed a phasing algorithm that incorporates sequencing read information, population and individual genotype data to provide more accurate haplotype reconstruction.
Researchers in Carlos Bustamante's lab at Stanford have developed a method for detecting whether an individual is present in a mixture of genomes. It uses only queries about the presence of alleles to make this decision using genome-wide SNP data.
Stanford researchers have discovered a fast, discriminative method for inferring local ancestry and correcting phase errors. This local ancestry inference method is both faster and more accurate than the previous state-of-the-art.
Stanford researchers have developed a method for estimating the risk for disease on a genome-wide scale while incorporating population and familial haplotype phasing.